Skip to
  1. Homepage
  2. Rare diseases
  3. Search
Simple search

Simple search

(*) mandatory field


Other search option(s)

Fanconi anemia

Synonym(s) Fanconi pancytopenia
Prevalence 1-9 / 1 000 000
Inheritance Autosomal recessive
or X-linked recessive
Age of onset Childhood
  • D61.0
  • C0015625
  • D005199
  • 10055206


Disease definition

Fanconi anemia (FA) is a hereditary DNA repair disorder characterized by progressive pancytopenia with bone marrow failure, variable congenital malformations and predisposition to develop hematological or solid tumors.


Recent determination of the carrier frequency gave an estimate of more than 1/200, with an expected prevalence at birth of at least 1/160,000. In certain populations, the carrier frequency is much higher, due to founder mutations. Until now, more than 2,000 cases have been reported in the literature.

Clinical description

In 2/3 of patients, the first signs of FA are congenital malformations that may involve the skeleton, skin, uro-genital, cardio-pulmonary, gastrointestinal and central nervous systems. Limb anomalies are unilateral or bilateral, the latter being frequently asymmetrical. Minor anomalies can also be present such as low height and weight, microcephaly and/or microphthalmia. Skin pigmentation abnormalities and hypoplastic thenar eminence are frequent. Almost 20% of patients have ear malformations with or without hearing loss. Congenital malformations may vary in a family. When congenital malformations are not prominent, diagnosis may be delayed until the onset of bone marrow failure (BMF), which occurs at a median age of 7 years. Hematologic abnormalities may occur at a younger age and, more rarely, in adults, with 90% of patients developing BMF by 40 years of age. Patients may develop acute myeloid leukemia, often preceded by myelodysplastic syndrome. Patients are also highly predisposed to solid tumors, of the head and neck or anogenital regions. Short stature is often secondary to hormonal deficiencies. Fertility is almost totally impaired in males, and is highly disturbed in half of females. Pregnancy is often complicated.


FA is due to mutations in genes involved in DNA repair and genomic stability. Fifteen genes representing 15 complementation groups have been identified.

Diagnostic methods

Given the high heterogeneity in genetic causation and clinical phenotype, and the pathogenic mechanism of FA, diagnosis relies on the evaluation of chromosomal breakage induced by diepoxybutane (DEB) or mitomycin C (MMC).

Differential diagnosis

FA clinical manifestations overlap with many malformation syndromes (Dubowitz, Seckel, Holt-Oram, Baller-Gerold, thrombocytopenia-absent radius, Nijmegen breakage syndromes, VACTERL association, dyskeratosis congenita; see these terms) and diagnosis of FA is often delayed until a patient develops BMF or malignancies. FA should be considered in the differential diagnosis of all young patients with BMF of unknown etiology. Other cancer predisposition syndromes (Bloom, Rothmund-Thomson or Werner syndromes; see these terms) or syndromes with pancytopenia (Diamond-Blackfan anemia, immune pancytopenia, Pearson or Shwachman-Diamond syndromes; see these terms) should be considered.

Antenatal diagnosis

Prenatal diagnosis is feasible with a DEB-induced chromosomal breakage assay or by molecular study when the mutation is known.

Genetic counseling

FA is usually an autosomal recessive disorder but X-linked transmission may occur.

Management and treatment

Supportive care includes transfusions of packed red blood cells (RBC) or leucodepleted platelets. The only curative treatment for hematologic manifestations is hematopoietic stem cell transplantation (HSCT). However, this approach tends to increase the solid tumor risk, which must be specially monitored. Symptomatic treatment includes oral androgen administration, which improves blood counts in some patients, in particular RBC. Administration of hematopoietic growth factor could be considered after bone marrow aspirate and biopsy, which should be regularly performed during the treatment. When malignancies develop, treatment is complicated by the sensitivity to radiation and chemotherapy of FA patients.


BMF and malignancies lead to a poor prognosis with a reduced life expectancy, which has been improved by HSCT and androgen treatment.

Expert reviewer(s)

  • Pr Arleen AUERBACH

(*) Required fields.

Attention: Only comments seeking to improve the quality and accuracy of information on the Orphanet website are accepted. For all other comments, please send your remarks via contact us. Only comments written in English can be processed.

Captcha image

Detailed information

Summary information
Emergency guidelines
Clinical practice guidelines
Article for general public
Clinical genetics review
Disability factsheet
Get Acrobat Reader
The documents contained in this web site are presented for information purposes only. The material is in no way intended to replace professional medical care by a qualified specialist and should not be used as a basis for diagnosis or treatment.